Gene RSc1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1933 
Symbol 
ID1220773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2108739 
End bp2109143 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content70% 
IMG OID637238327 
Productphage-like transmembrane protein 
Protein accessionNP_520054 
Protein GI17546652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.450392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.83944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC CCATCGCAAC CGGTACGTCC GCCGCCGCCG TTGCCGTCAC CAGCGTAGGC 
GCGGTTTCCC TGCTGCCCGG CGTGGACCCG GGCACCGTGC TTGGCGCCTT CGCCGGCGCG
GCAGTCTTCG CGCTCAATTC GGGCGAGCTG ACAGTCGCAA AGAAGCTGTC CTTCCTCTTG
CTGTCGATCG TGGCGGGTGT CCTGTCGGCG CCGCTCGCCG CGTCCCTGAT CGCCCGGGCG
CTGCCCGCCA ACACTGAAGT CAGCGAGGCC GTCGGTGCGC TGGTGGCCTC CACGGTGATG
GTGCGGCTGC TGCTGGCGCT GATCCGCGCG GCCGACAACA GCGACAAGCT GTTGGCCGCC
CTGCGGGGCG GCAGCAGCGA CAACCGTGGA GGAAACCAAC CGTGA
 
Protein sequence
MAEPIATGTS AAAVAVTSVG AVSLLPGVDP GTVLGAFAGA AVFALNSGEL TVAKKLSFLL 
LSIVAGVLSA PLAASLIARA LPANTEVSEA VGALVASTVM VRLLLALIRA ADNSDKLLAA
LRGGSSDNRG GNQP