7 homologs were found in PanDaTox collection
for query gene RPC_3628 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007925  RPC_3628  hypothetical protein  100 
 
 
71 aa  145  2.0000000000000003e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.770207  decreased coverage  0.00338778 
 
 
-
 
NC_007958  RPD_3215  hypothetical protein  69.01 
 
 
70 aa  78.6  0.00000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.405861  normal 
 
 
-
 
NC_011004  Rpal_3735  hypothetical protein  71.83 
 
 
70 aa  79.3  0.00000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2252  hypothetical protein  70.42 
 
 
70 aa  78.2  0.00000000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007959  Nham_4196  hypothetical protein  50.75 
 
 
71 aa  55.8  0.0000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.502651  n/a   
 
 
-
 
NC_009485  BBta_4265  hypothetical protein  55.93 
 
 
65 aa  50.4  0.000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.4137 
 
 
-
 
NC_010581  Bind_2991  hypothetical protein  50.75 
 
 
84 aa  41.2  0.004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.856918 
 
 
-
 
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