Gene RPC_3628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3628 
Symbol 
ID3970643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4035624 
End bp4035839 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content66% 
IMG OID637926736 
Producthypothetical protein 
Protein accessionYP_533482 
Protein GI90425112 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.770207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00338778 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGAAAAG CCTATTACGA TATCGTCGGC CAGGAGAAGC ACTGGGCGGT GTTGCACGAC 
GGCGAGCCGG AAGGCGACTA CGTCAGCAAG GAGGCGGCTT TTGAGGCCGC CTGCGCCGCG
GCCTCGAATG CCATCAAGTT CGGTCATGAG GTGCGGGTCA CCGTACCGGG CCGCGACGAG
GCCGGGGGCT CGGCGCTCGG CGTGGCGAGC AATTAG
 
Protein sequence
MGKAYYDIVG QEKHWAVLHD GEPEGDYVSK EAAFEAACAA ASNAIKFGHE VRVTVPGRDE 
AGGSALGVAS N