12 homologs were found in PanDaTox collection
for query gene RPB_0710 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007778  RPB_0710  hypothetical protein  100 
 
 		 106 aa  216  7.999999999999999e-56  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_0141  hypothetical protein  76.84 
 
 		 107 aa  149  1e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_2301  hypothetical protein  56.82 
 
 		 93 aa  91.3  4e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_2546  hypothetical protein  55.68 
 
 		 87 aa  90.5  7e-18  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_2769  hypothetical protein  59.21 
 
 		 87 aa  89  2e-17  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.878546 
 
 
-
 
NC_010725  Mpop_2476  hypothetical protein  57.83 
 
 		 87 aa  87.8  4e-17  Methylobacterium populi BJ001  Bacteria  normal  0.610199  normal  0.0281385 
 
 
-
 
NC_011894  Mnod_4197  hypothetical protein  50.63 
 
 		 95 aa  84.3  4e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0280307  n/a   
 
 
-
 
NC_010511  M446_1183  hypothetical protein  60 
 
 		 93 aa  82.4  0.000000000000002  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_2936  hypothetical protein  55.38 
 
 		 95 aa  78.6  0.00000000000002  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00909943 
 
 
-
 
NC_010505  Mrad2831_0561  hypothetical protein  45 
 
 		 86 aa  66.2  0.0000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  hitchhiker  0.00401695  hitchhiker  0.00987084 
 
 
-
 
NC_009720  Xaut_2366  hypothetical protein  41.79 
 
 		 96 aa  50.8  0.000006  Xanthobacter autotrophicus Py2  Bacteria  normal  0.202273  normal  1 
 
 
-
 
NC_008044  TM1040_1825  hypothetical protein  38.1 
 
 		 186 aa  40.4  0.009  Ruegeria sp. TM1040  Bacteria  normal  0.0697125  normal  0.518045 
 
 
-
 
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