Gene TM1040_1825 details

Gene Information

• Locus tag: TM1040_1825
• ID: 4076971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ruegeria sp. TM1040
• Kingdom: Bacteria
• Replicon accession: NC_008044
• Strand: +
• Start bp: 1920125
• End bp: 1920685
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 638007140
• Product: hypothetical protein
• Protein accession: YP_613820
• Protein GI: 99081666

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0697125
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.518045
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAATATT TCCTTGCTCT GCTGGCAATG GCCGCTGCCA CGCCGGCCCT TGCCGACTCC 
TATTGCGACG ATCTGTGGTT CACCCGAAAT GCCATCATGG ACCGGGCGGG CTATTGCTTT 
GGCTCTTCTC TTGGAAAACA TGTCTTTGAC AATGGCGATT GCATCGGGAC CTCTGTCACC 
CTCTCAGAGA TGGATGCGAC CCGGGTGGCC AAGCTCAAAG CGCAGGAACG CGAAGCCGGA 
TGCCGGGTCG ATACCAGCCG CAGCAGGCTC GATGTCTTGG ACCTGCGCTA CCGGCAGCGG 
CTGGTGGACC TTCCGGTGAC AGATGGGCTG GAAAGCACCT GCATCGGCTG GCGCGGCGAT 
CCCCTGCCCC TGCGCGCAGG CCATGGCCTC AATACGGATG TGATAGGGCA GGTCCTGCCC 
GGAGACACGC TCAACTACGG CCATTATCCA GTGGGCGGCT GGAGCTATGT GACGGTGCAT 
GACAGCGACT GGCACCTCAA GAGCGCAGGT TGGTATCGCG TTGATGCCTA TCCGCAGCGG 
TGCGCCCAGT TCGCCGGGTG A 

 

Protein sequence

MKYFLALLAM AAATPALADS YCDDLWFTRN AIMDRAGYCF GSSLGKHVFD NGDCIGTSVT 
LSEMDATRVA KLKAQEREAG CRVDTSRSRL DVLDLRYRQR LVDLPVTDGL ESTCIGWRGD 
PLPLRAGHGL NTDVIGQVLP GDTLNYGHYP VGGWSYVTVH DSDWHLKSAG WYRVDAYPQR 
CAQFAG