6 homologs were found in PanDaTox collection
for query gene PputGB1_4752 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010322  PputGB1_4752  hypothetical protein  100 
 
 
137 aa  286  9e-77  Pseudomonas putida GB-1  Bacteria  normal  0.256853  normal  0.817981 
 
 
-
 
NC_010814  Glov_0292  hypothetical protein  52.94 
 
 
141 aa  134  6.0000000000000005e-31  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4748  type II restriction enzyme EcoRII  43.9 
 
 
402 aa  57.8  0.00000005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0131811  normal  0.278195 
 
 
-
 
NC_011667  Tmz1t_2373  restriction endonuclease-like protein  38.53 
 
 
333 aa  56.2  0.0000001  Thauera sp. MZ1T  Bacteria  normal  hitchhiker  0.0000067766 
 
 
-
 
NC_009470  Acry_3581  hypothetical protein  44.3 
 
 
412 aa  54.3  0.0000006  Acidiphilium cryptum JF-5  Bacteria  normal  0.187235  n/a   
 
 
-
 
NC_009832  Spro_0571  Type II site-specific deoxyribonuclease  34.94 
 
 
404 aa  41.6  0.003  Serratia proteamaculans 568  Bacteria  normal  0.201389  normal 
 
 
-
 
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