7 homologs were found in PanDaTox collection
for query gene PputGB1_4150 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010322  PputGB1_4150  hypothetical protein  100 
 
 
211 aa  439  9.999999999999999e-123  Pseudomonas putida GB-1  Bacteria  normal  0.0635518  normal  0.260836 
 
 
-
 
NC_002947  PP_1920  hypothetical protein  23.81 
 
 
406 aa  53.9  0.000002  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.000000453482 
 
 
-
 
NC_007963  Csal_2905  hypothetical protein  26.63 
 
 
274 aa  45.4  0.0006  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2432  hypothetical protein  25.3 
 
 
322 aa  45.1  0.0007  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009704  YpsIP31758_A0017  hypothetical protein  21.28 
 
 
260 aa  43.5  0.002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3600  hypothetical protein  27.59 
 
 
314 aa  41.6  0.008  Flavobacterium johnsoniae UW101  Bacteria  normal  0.529933  n/a   
 
 
-
 
NC_008347  Mmar10_1434  hypothetical protein  22.28 
 
 
347 aa  41.2  0.01  Maricaulis maris MCS10  Bacteria  normal  0.0892001  decreased coverage  0.0000000284057 
 
 
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