| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4150 |
|---|
| Symbol | |
|---|
| ID | 5871950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4635673 |
|---|
| End bp | 4636308 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641549278 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001670376 |
|---|
| Protein GI | 167035145 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0635518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.260836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGG ATCGAGAGAG AGAGCTTGAC TACGAGTATG AACAATACCA GGCAGAAATG
AAGTGGTTTG AGGAACACCC CATTCTTGAA ACATACACCA TCTTTACTGA GAAGCTCAAA
CAACTGAAGC TGATGATGGC CAAGGGCGGC GATCCATTCG ATTCCCAAAT GCTCCGAAAA
ATGGCCTATG TACACGCAGT CACGCTATTT GAAGCCATGA TAGGTGACGT ACTGAAGGCA
ACGGTATTAG CCTACCCCTG CTTGATGAAG CGTCTAATTA GCAAATTAGG CGAAGACAAG
ACCCGAAAAT TTCAGCTTAA CGAGATTGCA GAACTTGGGC TAAATGGCAT TATGCTCGGA
ATTCTCAATG AGCAGCTTTA CCACAACCCC GTAACAGTTA AGCGCTTTGT CAGCACCATC
ACTGATCAAC CGATGTCTGA CAAGCATATG GCACTGATGC AGAGCGTTAT TGAAAAAAGA
CACGATTTAG TTCACAGAGA TGGAAAGACA GTTAATGGTG AACCCCATGA AATTGATGAG
AGCACTGTAA ACGCTAGCAT CGAGGTAATT GAAAATTTTG CAGAAGAGAT TTTTGAAAAC
CTTGATTCAG CAATGAAGAA TAGTCAAAAA CCATAA
|
|---|
| Protein sequence | MEQDRERELD YEYEQYQAEM KWFEEHPILE TYTIFTEKLK QLKLMMAKGG DPFDSQMLRK
MAYVHAVTLF EAMIGDVLKA TVLAYPCLMK RLISKLGEDK TRKFQLNEIA ELGLNGIMLG
ILNEQLYHNP VTVKRFVSTI TDQPMSDKHM ALMQSVIEKR HDLVHRDGKT VNGEPHEIDE
STVNASIEVI ENFAEEIFEN LDSAMKNSQK P
|
|---|
| |