8 homologs were found in PanDaTox collection
for query gene PputGB1_3482 on replicon NC_010322
Organism: Pseudomonas putida GB-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010322  PputGB1_3482  hypothetical protein  100 
 
 		 101 aa  202  9e-52  Pseudomonas putida GB-1  Bacteria  normal  0.247777  normal  0.0230575 
 
 
-
 
NC_009512  Pput_3226  hypothetical protein  94.06 
 
 		 101 aa  159  2e-38  Pseudomonas putida F1  Bacteria  normal  0.512846  normal  0.92004 
 
 
-
 
NC_010501  PputW619_1966  hypothetical protein  85 
 
 		 100 aa  139  9.999999999999999e-33  Pseudomonas putida W619  Bacteria  decreased coverage  0.0000301567  normal  0.0233516 
 
 
-
 
NC_007005  Psyr_2161  hypothetical protein  34.69 
 
 		 101 aa  56.6  0.0000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.555736  normal  1 
 
 
-
 
NC_004578  PSPTO_2377  hypothetical protein  35.71 
 
 		 101 aa  55.5  0.0000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.811225  n/a   
 
 
-
 
NC_007492  Pfl01_1930  hypothetical protein  55 
 
 		 100 aa  45.1  0.0004  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00527787  normal  1 
 
 
-
 
NC_012560  Avin_05820  hypothetical protein  28.57 
 
 		 101 aa  41.2  0.005  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_4133  hypothetical protein  29.55 
 
 		 99 aa  40.8  0.006  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.0000000000225258  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>