6 homologs were found in PanDaTox collection
for query gene PSPTO_2377 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2377  hypothetical protein  100 
 
 
101 aa  199  9.999999999999999e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.811225  n/a   
 
 
-
 
NC_007005  Psyr_2161  hypothetical protein  82.18 
 
 
101 aa  166  7e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.555736  normal 
 
 
-
 
NC_009512  Pput_3226  hypothetical protein  36.9 
 
 
101 aa  48.1  0.00004  Pseudomonas putida F1  Bacteria  normal  0.512846  normal  0.92004 
 
 
-
 
NC_010322  PputGB1_3482  hypothetical protein  40 
 
 
101 aa  46.6  0.0001  Pseudomonas putida GB-1  Bacteria  normal  0.247777  normal  0.0230575 
 
 
-
 
NC_010501  PputW619_1966  hypothetical protein  38.46 
 
 
100 aa  43.9  0.0007  Pseudomonas putida W619  Bacteria  decreased coverage  0.0000301567  normal  0.0233516 
 
 
-
 
NC_012560  Avin_05820  hypothetical protein  33.7 
 
 
101 aa  43.1  0.001  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
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