6 homologs were found in PanDaTox collection
for query gene Plav_3330 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_3330  hypothetical protein  100 
 
 
372 aa  738    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0924667 
 
 
-
 
NC_008347  Mmar10_1248  hypothetical protein  32.29 
 
 
367 aa  144  3e-33  Maricaulis maris MCS10  Bacteria  normal  hitchhiker  0.00288119 
 
 
-
 
NC_007643  Rru_A2166  hypothetical protein  36.44 
 
 
445 aa  95.9  1e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.214171  n/a   
 
 
-
 
NC_007794  Saro_0900  hypothetical protein  28.03 
 
 
422 aa  53.9  0.000005  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1756  hypothetical protein  26.62 
 
 
424 aa  52  0.00001  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.120659  normal  0.281233 
 
 
-
 
NC_009511  Swit_0035  hypothetical protein  26.72 
 
 
404 aa  47.8  0.0003  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
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