Gene Sala_1756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1756 
Symbol 
ID4081991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1850665 
End bp1851939 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content69% 
IMG OID638010131 
Producthypothetical protein 
Protein accessionYP_616802 
Protein GI103487241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.120659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.281233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGG CCGCCTTTCC CCGCTTCGCC CCGAGCCTGT CCCTTCGCGC TTTTGCACCC 
CGCGACTGGC GCTGGGCGGC GCTCATCGGC CTTTTCTTCG CGATCCTGCT CGCCGGGATC
GTGGATGGAC AGATCATGCG GGGCAATCGC GGCATCACGC CGATCAATTC GAGCGGCGAT
TTCCTGGCGA GCGGCATCCG CATCGACGTC ACCGGCGACA ATGCCGACGA TGCGCGGACA
AAGGGCTGGC GCGAGGCGCA GCGGCGGGGA TGGGCGCAGC TCTATCGCCG CCTCAACGGC
ACCGACGGCC CGGCGCTCAG CGATTCGGTG CTCGACGGCA TCGTCACCGC GATCGTCGTC
GAGGAGGAAC AGATCGGCCC GCGCCGCTAT GTCGCGCGGC TCGGCGTCCA GTTCGACCGC
GTGCGCGCGG GACAGATTCT CGGCGTCAGC GGACGCACGC TGCGCTCGCC GCCGCTGCTC
GTCATCCCGG TCTATTCGGT CGATGGCATC CAGCAGGTGT TCGAACAGCG CAGCGCGTGG
CAGCGCGCCT GGGCCGAATA TAATACGGGG CAGAGCGCGA TCGACTATGT CCGCACCGCG
GGCACCGGCG CCGACACGCT GCTGCTCAAT CCGGGGCAGA TCGGGCGCCG CAGCCGCGTA
TGGTGGCGCG TCATCCTCGA CCAATATGGG GCGGCCGACG TGCTGATCCC GATCGCGCGC
GTCGAATACA GCTATCCCGG TGGCCCGATC CGCGGCCATT TCACCGCGCG CTTCGGCCCC
GACAACAAGC ATATCGCCAG CTTCGCGATG ACGGGACCCA GCCCCGCGGC GCTGCCCGAC
ATGATGGAAA AGGCGGTCGC GCGCATGGAC CGCATCTATA CCGAGGCGCT GGAGGCCGGT
GTGCTGCGCA CCGACACCTA TCTCGTGCTC GAAAAGCCGA TCGAGCGCGA GGACCTGCCC
GAAGAGACGA CCGCGAACGA CACGGACGCG CTGCCCGCCG AAACCGACGG CAGCGTCCCC
GTCGCGGGAC CGGCGGGTGT GCAGAGCTTC ACCGTCCAAT ATAGTTCGCC CGACGTCGAA
TCGGTCACCG CGACCGAGCG CGCGGTCGCC GCCGCTGCGG GAGTCCAGTC GGCATCGACG
ACCAGCCTCG CGCTCGGCGG CACGTCGGTG ATGCGCGTGA CCTTCCGCGG CGACCTGGCG
GCGCTGCGTG CGGCGCTCGC GGCACGCGGC TTCACCGTGC AGGAAGGCGG CGGCCAGCTC
CGGATCAGCC GCTGA
 
Protein sequence
MISAAFPRFA PSLSLRAFAP RDWRWAALIG LFFAILLAGI VDGQIMRGNR GITPINSSGD 
FLASGIRIDV TGDNADDART KGWREAQRRG WAQLYRRLNG TDGPALSDSV LDGIVTAIVV
EEEQIGPRRY VARLGVQFDR VRAGQILGVS GRTLRSPPLL VIPVYSVDGI QQVFEQRSAW
QRAWAEYNTG QSAIDYVRTA GTGADTLLLN PGQIGRRSRV WWRVILDQYG AADVLIPIAR
VEYSYPGGPI RGHFTARFGP DNKHIASFAM TGPSPAALPD MMEKAVARMD RIYTEALEAG
VLRTDTYLVL EKPIEREDLP EETTANDTDA LPAETDGSVP VAGPAGVQSF TVQYSSPDVE
SVTATERAVA AAAGVQSAST TSLALGGTSV MRVTFRGDLA ALRAALAARG FTVQEGGGQL
RISR