11 homologs were found in PanDaTox collection
for query gene Pden_3657 on replicon NC_008687
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008687  Pden_3657  hypothetical protein  100 
 
 
111 aa  224  2e-58  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2010  hypothetical protein  36.61 
 
 
120 aa  79.7  0.00000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_5241  hypothetical protein  37.5 
 
 
124 aa  65.1  0.0000000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4703  hypothetical protein  34.23 
 
 
124 aa  64.3  0.0000000005  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.138757 
 
 
-
 
NC_011757  Mchl_5169  hypothetical protein  34.23 
 
 
124 aa  64.3  0.0000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.562248  normal  0.293542 
 
 
-
 
NC_007494  RSP_3614  hypothetical protein  32.73 
 
 
116 aa  64.3  0.0000000006  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1659  hypothetical protein  32.94 
 
 
233 aa  53.5  0.0000008  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2283  hypothetical protein  35.59 
 
 
122 aa  50.1  0.000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.975705  normal 
 
 
-
 
NC_014210  Ndas_1757  hypothetical protein  53.19 
 
 
127 aa  49.7  0.00001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.260151  hitchhiker  0.00785214 
 
 
-
 
NC_012803  Mlut_16120  hypothetical protein  29.27 
 
 
123 aa  44.3  0.0006  Micrococcus luteus NCTC 2665  Bacteria  normal  0.614948  n/a   
 
 
-
 
NC_009338  Mflv_4937  hypothetical protein  29.41 
 
 
121 aa  40.8  0.006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.320154  normal  0.758938 
 
 
-
 
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