7 homologs were found in PanDaTox collection
for query gene Pden_1340 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008686  Pden_1340  hypothetical protein  100 
 
 
105 aa  205  1e-52  Paracoccus denitrificans PD1222  Bacteria  normal  0.538287  normal 
 
 
-
 
NC_009952  Dshi_2594  hypothetical protein  49.32 
 
 
90 aa  60.1  0.00000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00568215 
 
 
-
 
NC_009050  Rsph17029_3567  hypothetical protein  54 
 
 
80 aa  52.8  0.000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.256301  normal  0.0576732 
 
 
-
 
NC_007802  Jann_2252  hypothetical protein  43.94 
 
 
90 aa  49.3  0.00002  Jannaschia sp. CCS1  Bacteria  normal  0.308715  normal 
 
 
-
 
NC_009429  Rsph17025_3392  hypothetical protein  52 
 
 
85 aa  48.9  0.00002  Rhodobacter sphaeroides ATCC 17025  Bacteria  hitchhiker  0.0077674  normal 
 
 
-
 
NC_009952  Dshi_1705  hypothetical protein  45.45 
 
 
112 aa  48.9  0.00002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0340877  normal  0.0197535 
 
 
-
 
NC_008044  TM1040_0079  hypothetical protein  51.79 
 
 
62 aa  46.2  0.0001  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>