Gene Dshi_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1705 
Symbol 
ID5713271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1773613 
End bp1773951 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content72% 
IMG OID641267622 
Producthypothetical protein 
Protein accessionYP_001533048 
Protein GI159044254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0340877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0197535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA ATCTCGGCCA GACCCACCTG CGCTGCCGCC GGCGGCGCGG GGATCCCATG 
GGCGACTATG ACCGCCTGCC TGCGCATCTG CGCGCCTGGC TGGCGGGGGC CGCCCTGCCC
TGGCGGCCCC GCTCGGTCCG CCGTGCCTAT GCCAAGGCGC TGGCCCGCAC CGGCGATCCG
GACACGGCCT TGGCCGAACT GGACCGCCTG CAAGCCGTCC GCCTGGCCCA GGCCTCAACC
GCCCCGGCTT CATCTGTGCA AAAATACTCC GGGGGAGTCG GGCATGCGAC GGGGGCAGCG
CCCCCTATTC CGGCTCGAAA TTCAGCGCCA CACCATTGA
 
Protein sequence
MTRNLGQTHL RCRRRRGDPM GDYDRLPAHL RAWLAGAALP WRPRSVRRAY AKALARTGDP 
DTALAELDRL QAVRLAQAST APASSVQKYS GGVGHATGAA PPIPARNSAP HH