7 homologs were found in PanDaTox collection
for query gene Patl_1958 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_1958  hypothetical protein  100 
 
 
206 aa  417  1e-116  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.217066  n/a   
 
 
-
 
NC_003910  CPS_1639  hypothetical protein  63.1 
 
 
204 aa  250  1e-65  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3352  hypothetical protein  41.24 
 
 
210 aa  148  6e-35  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.421169 
 
 
-
 
NC_008531  LEUM_1902  hypothetical protein  49.02 
 
 
113 aa  102  4e-21  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_2518  hypothetical protein  36.84 
 
 
231 aa  47.8  0.0001  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3418  hypothetical protein  28.83 
 
 
218 aa  46.6  0.0002  Cyanothece sp. PCC 7425  Bacteria  normal  0.991745  normal 
 
 
-
 
NC_008009  Acid345_4771  hypothetical protein  30.26 
 
 
155 aa  43.5  0.002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0767998  decreased coverage  0.00264943 
 
 
-
 
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