Gene Patl_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1958 
Symbol 
ID4172093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp2374217 
End bp2374837 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content46% 
IMG OID638054966 
Producthypothetical protein 
Protein accessionYP_661530 
Protein GI109898275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.217066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAAA AGCACACGGA GCAAAAGTAT ATTTCCGGTA TGGGCAAAGC GTCAGTGGTA 
CCAGAAGAAA TAAAGGGGTG GAATTGGGGC GCCTTTTTAC TGAATTGGAT ATGGGGTATC 
GGGAATAGTA CCTTCATTGC TTTGCTGATG TTTGTGCCAC TGGTGAATGT TGTGATGATG 
TTTGTTTTAG GGGCTAAAGG AAATGAGTGG GCTTGGCAGA ACCGTACCTG GCGAGATGTA 
GCACATTTCA AATCCGTCCA AAAAAAGTGG CGTAATGCGG GTCTTACGCT GGTGTTTGTT 
GTCTTCCCGC TCATGTTTGT TGCGGTGATG AGCATGATGA AAGGGGAGGC GTACGATTTG 
TCGGTACAAG CCGTCAAAAC GCACCCTGGG GTTATCGCCT TGGTGGGTGA AAACCCTGAG 
CCTGGTTTTT TTGTGTTGGG TGAAATCACC TATTCAGGTG AAGGTGGTAA AGCAAATTTG 
AATTACACCA TTAGCGGTGA TAAATCCGCA GCCGAGGTCT ATGTTTATGC CACTGACGTG 
GCAGATAAAT GGGTACTGCA AGAGGTTGCG GTGATTAATA AGGAGCAAGG CGAAATAATT 
TTTGCTGTAT CTGCGCAATA G
 
Protein sequence
MEQKHTEQKY ISGMGKASVV PEEIKGWNWG AFLLNWIWGI GNSTFIALLM FVPLVNVVMM 
FVLGAKGNEW AWQNRTWRDV AHFKSVQKKW RNAGLTLVFV VFPLMFVAVM SMMKGEAYDL 
SVQAVKTHPG VIALVGENPE PGFFVLGEIT YSGEGGKANL NYTISGDKSA AEVYVYATDV 
ADKWVLQEVA VINKEQGEII FAVSAQ