7 homologs were found in PanDaTox collection
for query gene PSPTO_4754 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_4754  hypothetical protein  100 
 
 
281 aa  587  1e-167  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3900  hypothetical protein  67.42 
 
 
267 aa  392  1e-108  Delftia acidovorans SPH-1  Bacteria  normal  0.114013  decreased coverage  0.0059619 
 
 
-
 
NC_009484  Acry_0800  hypothetical protein  43.82 
 
 
263 aa  234  1.0000000000000001e-60  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3053  hypothetical protein  47.77 
 
 
247 aa  211  1e-53  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_2351  hypothetical protein  37.59 
 
 
266 aa  164  2.0000000000000002e-39  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01210  site-specific recombinase, resolvase family protein  28.04 
 
 
283 aa  58.5  0.0000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.00000182945  n/a   
 
 
-
 
NC_012918  GM21_1243  hypothetical protein  23.99 
 
 
294 aa  47  0.0004  Geobacter sp. M21  Bacteria  n/a    unclonable  2.1484499999999998e-35 
 
 
-
 
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