Gene PSPTO_4754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4754 
Symbol 
ID1186437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5391079 
End bp5391924 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content51% 
IMG OID637396075 
Producthypothetical protein 
Protein accessionNP_794489 
Protein GI28871870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGACT CATTTTCTAA GCGCAATGGA TTCGCTAACG CTGTTGAAGC CGAGATCACA 
GTCAGGGAGG ACGCGCCCGA GGAGCTGCGA GGCTATCTCG TACAGCTCTG TTATGAATGC
GGATTGAAGC CGAGTGACTT GCGAGCCATC CTGTGCAAGG CGCTAAAAAA ACAACCTGAC
CAGAACAATT GGAGTGAGTT TCCCAACGTA GATTGGGAGG TCAACGGTCT ATTGAGTGAA
TGCAAATGGT ACAAGGTTTA CGACGTCATT GAGCGCATTC AGCATCATTT AGGTGAGCGT
AATTACAGCT CTGACATCTA CGAGCATTTC CACACGGAAC TGAATGAATA TTTCGTCGAG
AACGGCATCG GGTGGCAGGT AGCAGATGGC CATGTTGAGA TCCGGGGGCC CGAGTCATTT
GAAGTCATTG TGCGCCATGC GCGGAAAACT GAGCATGACT ATGGTCATGT CACCGCCAGC
AAAGAGTTAC ATGAAGCTAT AGGTGACCTT TCGCGTCGTC CCAATCCAGA TCCAACAGGC
GCCATTCAGC ACGCCATGGC ATCACTGGAG TGCGTCGCTC GGCAGGTGAC AGGGGACGTT
AAGGCTAACC TTGGCGACAT CATGAAAAGG CACGGCACCA TCATTCCAGC GCCGCTGGAT
CAAGCGGTAG TCAAGGCTTG GGGATACGCA TCTGAAAATG GTCGTCACAT ACGAGAAGGA
CGAGAACCTT CGTTCAATGA GGCAGAACTT ATCGTTGGGC TCTGTGCATC TCTAGGCACC
TATTTGATTA AGAATGCCCA GTTGGCTGAG TCGAACCAAG GGGATACTGA GTGGGATGCA
TTCTAG
 
Protein sequence
MRDSFSKRNG FANAVEAEIT VREDAPEELR GYLVQLCYEC GLKPSDLRAI LCKALKKQPD 
QNNWSEFPNV DWEVNGLLSE CKWYKVYDVI ERIQHHLGER NYSSDIYEHF HTELNEYFVE
NGIGWQVADG HVEIRGPESF EVIVRHARKT EHDYGHVTAS KELHEAIGDL SRRPNPDPTG
AIQHAMASLE CVARQVTGDV KANLGDIMKR HGTIIPAPLD QAVVKAWGYA SENGRHIREG
REPSFNEAEL IVGLCASLGT YLIKNAQLAE SNQGDTEWDA F