Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4754 |
Symbol | |
ID | 1186437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5391079 |
End bp | 5391924 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637396075 |
Product | hypothetical protein |
Protein accession | NP_794489 |
Protein GI | 28871870 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGGACT CATTTTCTAA GCGCAATGGA TTCGCTAACG CTGTTGAAGC CGAGATCACA GTCAGGGAGG ACGCGCCCGA GGAGCTGCGA GGCTATCTCG TACAGCTCTG TTATGAATGC GGATTGAAGC CGAGTGACTT GCGAGCCATC CTGTGCAAGG CGCTAAAAAA ACAACCTGAC CAGAACAATT GGAGTGAGTT TCCCAACGTA GATTGGGAGG TCAACGGTCT ATTGAGTGAA TGCAAATGGT ACAAGGTTTA CGACGTCATT GAGCGCATTC AGCATCATTT AGGTGAGCGT AATTACAGCT CTGACATCTA CGAGCATTTC CACACGGAAC TGAATGAATA TTTCGTCGAG AACGGCATCG GGTGGCAGGT AGCAGATGGC CATGTTGAGA TCCGGGGGCC CGAGTCATTT GAAGTCATTG TGCGCCATGC GCGGAAAACT GAGCATGACT ATGGTCATGT CACCGCCAGC AAAGAGTTAC ATGAAGCTAT AGGTGACCTT TCGCGTCGTC CCAATCCAGA TCCAACAGGC GCCATTCAGC ACGCCATGGC ATCACTGGAG TGCGTCGCTC GGCAGGTGAC AGGGGACGTT AAGGCTAACC TTGGCGACAT CATGAAAAGG CACGGCACCA TCATTCCAGC GCCGCTGGAT CAAGCGGTAG TCAAGGCTTG GGGATACGCA TCTGAAAATG GTCGTCACAT ACGAGAAGGA CGAGAACCTT CGTTCAATGA GGCAGAACTT ATCGTTGGGC TCTGTGCATC TCTAGGCACC TATTTGATTA AGAATGCCCA GTTGGCTGAG TCGAACCAAG GGGATACTGA GTGGGATGCA TTCTAG
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Protein sequence | MRDSFSKRNG FANAVEAEIT VREDAPEELR GYLVQLCYEC GLKPSDLRAI LCKALKKQPD QNNWSEFPNV DWEVNGLLSE CKWYKVYDVI ERIQHHLGER NYSSDIYEHF HTELNEYFVE NGIGWQVADG HVEIRGPESF EVIVRHARKT EHDYGHVTAS KELHEAIGDL SRRPNPDPTG AIQHAMASLE CVARQVTGDV KANLGDIMKR HGTIIPAPLD QAVVKAWGYA SENGRHIREG REPSFNEAEL IVGLCASLGT YLIKNAQLAE SNQGDTEWDA F
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