7 homologs were found in PanDaTox collection
for query gene PSPTO_4743 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_4743  hypothetical protein  100 
 
 
633 aa  1314    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0784286  n/a   
 
 
-
 
NC_010676  Bphyt_6479  integrase family protein  23.66 
 
 
627 aa  149  2.0000000000000003e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010679  Bphyt_7325  integrase family protein  23.66 
 
 
627 aa  149  2.0000000000000003e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  hitchhiker  0.00394718 
 
 
-
 
NC_010681  Bphyt_0249  integrase family protein  23.66 
 
 
627 aa  149  2.0000000000000003e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010627  Bphy_7604  hypothetical protein  27.68 
 
 
353 aa  137  5e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012855  Rpic12D_4955  hypothetical protein  25.81 
 
 
605 aa  86.7  0.000000000000001  Ralstonia pickettii 12D  Bacteria  normal  0.662474  normal  0.750948 
 
 
-
 
NC_012856  Rpic12D_2776  hypothetical protein  25.81 
 
 
605 aa  86.7  0.000000000000001  Ralstonia pickettii 12D  Bacteria  normal  0.917762  normal  0.826015 
 
 
-
 
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