Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7325 |
Symbol | |
ID | 6280582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010679 |
Strand | + |
Start bp | 54268 |
End bp | 56151 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642619504 |
Product | integrase family protein |
Protein accession | YP_001893539 |
Protein GI | 187921950 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00394718 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCGCC TTTACGACGA AGTGCACATG CCGCTCGCGG AGGGCACAAT GCTGCTGCAC CCCGAGCGAG CGCTGCTCAA GTGGGAAGGC ATGAGCAGCC GTTCCGATAT CGGGCAGATC TGCTACCTGA GGCGTGACAC GTCAAGCTCG CACCGCGCGC GACGAACTTT CGATATCCTG AGCTTCAGCA TCGAACGCGT CAGGGTCGTA CGCCTGCTGG TGACGCAGCT TTCCGGGCGT ATGGCCCTTG GCGCGATGCG TCCGGCAACG ATCTCGATAG CGCTGCGCGT CGTGCTTGAT TTCGTCAATT GGGCCGACAG ACAGGGCTTG CATCAGGTGC TTTGTGACGA GAAGGCTACG GCGGAGGCAG TTCATCGCTA CTTCCGCGAG AAACGCGAAC AGGTTTCGCT GGGCAATCTG AACCGCAATT CCGTCGGCCA CGATCAGCGT AATCTGTTGT CGATGCTCCG TGAGTTTTTC GGAAACGACG ACTTCTGCAC CGACGCGAGG GTGCTGCGCC GCCAACTGGA TGCCTCTGTG CCGACTGCTG TGCCTGACAC CGAGGCACAA GCCGCCCTGC TCGCGTGGGC TGACGCGCTC TTCACCGGCA TCAGCACCCT GGTGCTCGAC TTCAAGTCGT ACCCGGTGCG CGTAAGCACG GCGCGTGGCG AGAGTCTTTG CCTAGTTCCG CACAGACACC ACCGTCGTGA AGACGACAAC TTGCACGGCC ACCTGCTTGG CTGGAACCTG GAGACCGGGG AGCTGCGCAC GCGGGAAGAA ATCGCGACGC ACATGGCTGC GGCAGGCGCT AAAGATCCTC GTGCGCGTGC GTGGATGATC GCCTCGTTTG CGGCTAAACA TCTTAGGGCT GCGAACGAGG ATGCGCAATC AGCGATCCGT CGCTCGCACG CTTCAATGGC GACCCTTTGC TTCGCCGCGC TGTTCCTGGC CGAAACGGGC GTCAACCTCG CGCAACTGCT GGCCATGAAG TGGAGCCCGG AGCTTGTCGC GAGCCTGCAG GATACGTCAG TTGTACGTCA GACGTTTCGC GAGATCAAGT ACCGTGCAGG CGGGAAGGGG GTGACGTTCA CCGTCTCGCT GGGCTTCATG CCGAAGCTCA AGACGTATCT GGCGTTGCGA GAGTATCTGG TGCAGAACGC GGACTGCGAC GCGTTGTTCA TTCTAGCCGG GCATTACGCA AAGCGACGAC GGCCAATGGG TCTCCCAACT CAATTTCTGG CTCAGCTTTA CAGTCGACTC GATACGCTCG GGATCGTGCT ACCGCGCATT ACCGCACGTC AGTGGCGTGC GGCGAAGCAG GATTGGGCGG TGAGCAACCA CGACCCTGTC GTCGCAGCCA GACTGATGGG CCACTCCTTG GCCACGGCGC TGCGCTCATA CTCGAACGGC ACAGACGCCG CGCACAAGGC CGAGATGGGC GCGTTCCTCG CTTCGGTCGA GAAGACCGTG CTGAAGCCCG GCAACGACCC GGCGGGCAGC ATCAGGAGCG CGGTGGGCGT CTGCATCGAG TTCCACAAAC CTGCGCCGAT CGCAGCTTCA GTCACCGTAC AGCCTGACTG CCGCTCGACC GAAGGATGTC TCTTCTGCGA CCAGTACCGC GTGCACGCCG ACGCCGCCGA CATCCGCAAG CTGCTGGGCT GCCGTCACTG CGTCAGGCTC GTGAGCGGGC GTGCTGACTC GATCGAGCAG TACGACACAT CGTTCGGCGC CGTGCTGCGG CGCGTTGACT TCCTGCTGGA TGAGCTGCGC AAGCGCGACG CCGCGCTGGT CGATCAGATC GAGCACGACG TTGATATCGA AGGGAATCTG GACGCGTTCT GGTCGGCCAA GCTCGACCAG CTTTACGAAC TGGGAGTGGC ATGA
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Protein sequence | MNRLYDEVHM PLAEGTMLLH PERALLKWEG MSSRSDIGQI CYLRRDTSSS HRARRTFDIL SFSIERVRVV RLLVTQLSGR MALGAMRPAT ISIALRVVLD FVNWADRQGL HQVLCDEKAT AEAVHRYFRE KREQVSLGNL NRNSVGHDQR NLLSMLREFF GNDDFCTDAR VLRRQLDASV PTAVPDTEAQ AALLAWADAL FTGISTLVLD FKSYPVRVST ARGESLCLVP HRHHRREDDN LHGHLLGWNL ETGELRTREE IATHMAAAGA KDPRARAWMI ASFAAKHLRA ANEDAQSAIR RSHASMATLC FAALFLAETG VNLAQLLAMK WSPELVASLQ DTSVVRQTFR EIKYRAGGKG VTFTVSLGFM PKLKTYLALR EYLVQNADCD ALFILAGHYA KRRRPMGLPT QFLAQLYSRL DTLGIVLPRI TARQWRAAKQ DWAVSNHDPV VAARLMGHSL ATALRSYSNG TDAAHKAEMG AFLASVEKTV LKPGNDPAGS IRSAVGVCIE FHKPAPIAAS VTVQPDCRST EGCLFCDQYR VHADAADIRK LLGCRHCVRL VSGRADSIEQ YDTSFGAVLR RVDFLLDELR KRDAALVDQI EHDVDIEGNL DAFWSAKLDQ LYELGVA
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