7 homologs were found in PanDaTox collection
for query gene PSPTO_3105 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_3105  hypothetical protein  100 
 
 
238 aa  493  1e-139  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  hitchhiker  0.000861503  n/a   
 
 
-
 
NC_007005  Psyr_2972  hypothetical protein  84.86 
 
 
185 aa  322  4e-87  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0213029 
 
 
-
 
NC_007492  Pfl01_2922  hypothetical protein  54.6 
 
 
172 aa  176  2e-43  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.314355  normal 
 
 
-
 
NC_009656  PSPA7_2818  hypothetical protein  47.77 
 
 
181 aa  136  2e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  0.01262  n/a   
 
 
-
 
NC_008463  PA14_33150  hypothetical protein  49.04 
 
 
181 aa  136  3.0000000000000003e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000356543  normal  0.0132813 
 
 
-
 
NC_008463  PA14_31440  hypothetical protein  30.86 
 
 
180 aa  67.4  0.0000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000000108899  hitchhiker  0.000000000979418 
 
 
-
 
NC_009656  PSPA7_2675  hypothetical protein  31.1 
 
 
164 aa  66.6  0.0000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0111181  n/a   
 
 
-
 
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