Gene PSPTO_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3105 
Symbol 
ID1184762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp3491560 
End bp3492276 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content58% 
IMG OID637394463 
Producthypothetical protein 
Protein accessionNP_792897 
Protein GI28870278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.000861503 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAGCTC ATGAATATGT CTCCAACAGA ATGTACAAAT TAGTACCAAA TGATACGGGG 
CAGGGCGGTC AGTGCCAAAC CCTGGCCCGG ATAACATCGT TATGTCCTTG CTCGATGCCG 
GCAACAGGCT CAGAATTTCA GGTCCACCGT TCTGGCGACC TGACCATGAT TGCTCTGCAA 
TACCGACGTT TCTTGCCAGG CCTGTGCCTG CTGCTGTGCG CTGGACAGGC CCATGCCACC 
GATGCGATGA TCATCTGGCC TGCGGGCTGG GAGGTCGAGT CGTTACCGAC CGAGTCAGAT 
ACGCCCGTTC AACCCTCCGT GCAGGTCAGA CAGCGCGCGG TTAAAAACGA TCAACGTGGA 
AACCCGCTGA TGGTCATGGA ATTGACCCAG ACGCGCCTGA GTCCCGGCCA TGAGGTCAAT 
GTTCAGGGGG TGCTGCTGGA GATGCGCAAA TCCGTGCAGG TCAATTTCGC CCGCAGCGGT 
CTGCAAAGTG TCTGCACGCA TGTTCGTGAG AGCCAGTTGA GCGTCGTGCC GGCGCTGGAA 
ACCACCTGCA CCATCACTCA GAACGGTGTG CATGTGCTGA CCCAGACGCT GGTGGCGGCT 
GCCAATAAAG AGATGGCCTG GTCGCTGTCG TACGCAGGGT CGGCTGAAGG TTATGCAGCC 
AACAAGGACG AGGCGTTACG CATTCGCGAG AGTCTGCGTC TGGAGGCCGA GCAGTAA
 
Protein sequence
MQAHEYVSNR MYKLVPNDTG QGGQCQTLAR ITSLCPCSMP ATGSEFQVHR SGDLTMIALQ 
YRRFLPGLCL LLCAGQAHAT DAMIIWPAGW EVESLPTESD TPVQPSVQVR QRAVKNDQRG 
NPLMVMELTQ TRLSPGHEVN VQGVLLEMRK SVQVNFARSG LQSVCTHVRE SQLSVVPALE 
TTCTITQNGV HVLTQTLVAA ANKEMAWSLS YAGSAEGYAA NKDEALRIRE SLRLEAEQ