9 homologs were found in PanDaTox collection
for query gene PSPTO_2979 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2979  hypothetical protein  100 
 
 
128 aa  263  5.999999999999999e-70  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  hitchhiker  0.00191455  n/a   
 
 
-
 
NC_007005  Psyr_2857  hypothetical protein  81.25 
 
 
125 aa  207  5e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.939091  normal  0.0279077 
 
 
-
 
NC_012791  Vapar_4846  Glyoxalase/bleomycin resistance protein/dioxygenase  74.22 
 
 
128 aa  205  2e-52  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4242  Glyoxalase/bleomycin resistance protein/dioxygenase  68.75 
 
 
129 aa  192  2e-48  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4350  Glyoxalase/bleomycin resistance protein/dioxygenase  57.14 
 
 
127 aa  137  3.9999999999999997e-32  Methylobacterium populi BJ001  Bacteria  normal  0.394705  normal 
 
 
-
 
NC_013158  Huta_1476  Glyoxalase/bleomycin resistance protein/dioxygenase  29.75 
 
 
211 aa  44.3  0.0005  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_008391  Bamb_4416  glyoxalase/bleomycin resistance protein/dioxygenase  33.87 
 
 
140 aa  43.5  0.001  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0225387 
 
 
-
 
NC_010001  Cphy_2631  glyoxalase/bleomycin resistance protein/dioxygenase  25.4 
 
 
126 aa  43.1  0.001  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000275731  n/a   
 
 
-
 
NC_013159  Svir_09940  lactoylglutathione lyase family protein  31.25 
 
 
280 aa  40.4  0.009  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>