Gene PSPTO_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2979 
Symbol 
ID1184634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3349079 
End bp3349465 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content52% 
IMG OID637394340 
Producthypothetical protein 
Protein accessionNP_792776 
Protein GI28870157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00191455 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAC TTTCATACGT CAACGTGTTC GCCCAGGACA TCGTCGCCTT GAGTGGTTTC 
TACTCGAAAT TGTTCGGCTT CAGCGAAATA GAAGCGATCA GATCGCCGAT TTTTCGTGGG
CTGGACACAG GCAAATCCTG CATCGGCTTC AATGCCCTCG ATGCCTACGA ATTGCTGGGC
CTGGATGAGT TCACTGACAG TACCGGATGC CGGTTTCTGC TAAATATCGA CGTGGAGGAG
CAATCCGACG TAGACAGGCT GGTGCCGCAG GCGGTGGCGC TAGGGGCGAG ATTGGTCAAG
GAGCCGTATC TGACGTATTA CCACTGGTAT CAGGCGGTTT TGCTGGATCC TGAGGGCAAT
ATATTCCGGA TTAACTTTAT GCTTTAA
 
Protein sequence
MSTLSYVNVF AQDIVALSGF YSKLFGFSEI EAIRSPIFRG LDTGKSCIGF NALDAYELLG 
LDEFTDSTGC RFLLNIDVEE QSDVDRLVPQ AVALGARLVK EPYLTYYHWY QAVLLDPEGN
IFRINFML