Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2979 |
Symbol | |
ID | 1184634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3349079 |
End bp | 3349465 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637394340 |
Product | hypothetical protein |
Protein accession | NP_792776 |
Protein GI | 28870157 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00191455 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAC TTTCATACGT CAACGTGTTC GCCCAGGACA TCGTCGCCTT GAGTGGTTTC TACTCGAAAT TGTTCGGCTT CAGCGAAATA GAAGCGATCA GATCGCCGAT TTTTCGTGGG CTGGACACAG GCAAATCCTG CATCGGCTTC AATGCCCTCG ATGCCTACGA ATTGCTGGGC CTGGATGAGT TCACTGACAG TACCGGATGC CGGTTTCTGC TAAATATCGA CGTGGAGGAG CAATCCGACG TAGACAGGCT GGTGCCGCAG GCGGTGGCGC TAGGGGCGAG ATTGGTCAAG GAGCCGTATC TGACGTATTA CCACTGGTAT CAGGCGGTTT TGCTGGATCC TGAGGGCAAT ATATTCCGGA TTAACTTTAT GCTTTAA
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Protein sequence | MSTLSYVNVF AQDIVALSGF YSKLFGFSEI EAIRSPIFRG LDTGKSCIGF NALDAYELLG LDEFTDSTGC RFLLNIDVEE QSDVDRLVPQ AVALGARLVK EPYLTYYHWY QAVLLDPEGN IFRINFML
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