10 homologs were found in PanDaTox collection
for query gene PSPTO_2683 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_2683  hypothetical protein  100 
 
 		 60 aa  123  1e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.446772  n/a   
 
 
-
 
NC_007005  Psyr_2416  hypothetical protein  90 
 
 		 60 aa  108  2.0000000000000002e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0904572  normal  0.707769 
 
 
-
 
NC_007492  Pfl01_3716  hypothetical protein  75.47 
 
 		 60 aa  85.9  2e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.212532  normal  0.868139 
 
 
-
 
NC_009512  Pput_1993  hypothetical protein  63.79 
 
 		 60 aa  81.3  0.000000000000004  Pseudomonas putida F1  Bacteria  hitchhiker  0.0000000000348245  decreased coverage  0.00000853865 
 
 
-
 
NC_002947  PP_3770  hypothetical protein  62.07 
 
 		 60 aa  79  0.00000000000002  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.0000131048  hitchhiker  0.00000677863 
 
 
-
 
NC_010322  PputGB1_2133  hypothetical protein  62.07 
 
 		 60 aa  78.6  0.00000000000003  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.000000000121334  hitchhiker  0.000000470737 
 
 
-
 
NC_010501  PputW619_2098  hypothetical protein  58.62 
 
 		 60 aa  75.1  0.0000000000003  Pseudomonas putida W619  Bacteria  normal  0.727852  normal  1 
 
 
-
 
NC_009439  Pmen_2128  hypothetical protein  57.14 
 
 		 68 aa  55.1  0.0000003  Pseudomonas mendocina ymp  Bacteria  normal  0.0722905  normal  0.190811 
 
 
-
 
NC_009656  PSPA7_2484  hypothetical protein  48.98 
 
 		 65 aa  54.3  0.0000006  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_28470  hypothetical protein  46.94 
 
 		 65 aa  52.4  0.000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.000281065 
 
 
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