3 homologs were found in PanDaTox collection
for query gene PSPTO_1399 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_1399  type III secretion protein HrpO  100 
 
 		 148 aa  290  4e-78  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.919251  n/a   
 
 
-
 
NC_007005  Psyr_1212  type III secretion protein HrpO  85.81 
 
 		 148 aa  249  1e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0281623  normal  0.824676 
 
 
-
 
NC_009439  Pmen_0042  hypothetical protein  52.7 
 
 		 148 aa  120  5e-27  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>