6 homologs were found in PanDaTox collection
for query gene PP_3040 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002947  PP_3040  pyocin R2_PP, holin  100 
 
 		 115 aa  229  1e-59  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.273925 
 
 
-
 
NC_007492  Pfl01_1137  pyocin R2_PP, holin  68.18 
 
 		 112 aa  160  4.0000000000000004e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.60007  normal  1 
 
 
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NC_010501  PputW619_4048  pyocin R2_PP, holin  65.74 
 
 		 111 aa  153  7e-37  Pseudomonas putida W619  Bacteria  hitchhiker  0.0000401284  hitchhiker  0.000000000000795709 
 
 
-
 
NC_010322  PputGB1_1193  pyocin R2_PP, holin  69.57 
 
 		 115 aa  149  1e-35  Pseudomonas putida GB-1  Bacteria  normal  0.244777  normal  0.0628053 
 
 
-
 
NC_008463  PA14_07990  hypothetical protein  51.72 
 
 		 149 aa  113  1.0000000000000001e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  2.99153e-16  hitchhiker  0.000214399 
 
 
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NC_009656  PSPA7_0758  hypothetical protein  52.78 
 
 		 117 aa  111  3e-24  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0231626  n/a   
 
 
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