Gene PputGB1_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1193 
Symbol 
ID5868953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1352887 
End bp1353234 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content65% 
IMG OID641546293 
Productpyocin R2_PP, holin 
Protein accessionYP_001667437 
Protein GI167032206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.244777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0628053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG AGCAACAAAC GTTAGCCGAA CTGCCGATCT GGATGGTGAT CGTGCTGTCC 
CTGGTCGGCG GTGTTTCGGG AGAGATGTGG CGGGCCGATA TGGCGGGGGC TCGCGGTTGG
GGGCTGATTC GCCGGTTGGC TTTGCGCTCT GGTGCCTGTG TGACCTGCGG TCTTTCGACC
AACATGTTGC TGTACGCCCT CGGCGTTTCG GTATGGGCGG CGGCGGCCGT TGGTTGCTTG
GCTGCGATGG CCGGTGCCGA TGTCGCTATC AACCTCTACA TGCGCTGGGC CGCGAAGCGC
CTGGGGCTGG AGCAGTCACC GCCCCAGGCC GGCGAGCCGG GGCAGTGA
 
Protein sequence
MNSEQQTLAE LPIWMVIVLS LVGGVSGEMW RADMAGARGW GLIRRLALRS GACVTCGLST 
NMLLYALGVS VWAAAAVGCL AAMAGADVAI NLYMRWAAKR LGLEQSPPQA GEPGQ