6 homologs were found in PanDaTox collection
for query gene PC1_3259 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_3259  hypothetical protein  100 
 
 		 326 aa  659    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.745249  n/a   
 
 
-
 
NC_013946  Mrub_0218  Csm4 family CRISPR-associated RAMP protein  28.21 
 
 		 295 aa  91.3  2e-17  Meiothermus ruber DSM 1279  Bacteria  normal  0.800628  normal  1 
 
 
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NC_014212  Mesil_0702  CRISPR-associated RAMP protein, Csm4 family  29.67 
 
 		 295 aa  85.9  9e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  0.464078  hitchhiker  0.00522087 
 
 
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NC_009253  Dred_1630  hypothetical protein  25 
 
 		 309 aa  84.7  0.000000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
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NC_008554  Sfum_1346  hypothetical protein  25.26 
 
 		 312 aa  46.2  0.0008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.85216  normal  1 
 
 
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NC_013502  Rmar_2823  CRISPR-associated RAMP protein, Csm4 family  24.19 
 
 		 339 aa  42.7  0.007  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
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