8 homologs were found in PanDaTox collection
for query gene PA14_52330 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008463  PA14_52330  hypothetical protein  100 
 
 
104 aa  218  1.9999999999999999e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.912922 
 
 
-
 
NC_009656  PSPA7_4589  hypothetical protein  96.15 
 
 
104 aa  211  3.9999999999999995e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  0.741123  n/a   
 
 
-
 
NC_007492  Pfl01_3965  hypothetical protein  71.43 
 
 
111 aa  159  2e-38  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1651  hypothetical protein  73.96 
 
 
102 aa  150  5.9999999999999996e-36  Pseudomonas putida GB-1  Bacteria  normal  0.397571  normal  0.497453 
 
 
-
 
NC_009439  Pmen_2106  hypothetical protein  67.31 
 
 
104 aa  149  8.999999999999999e-36  Pseudomonas mendocina ymp  Bacteria  normal  0.317583  decreased coverage  0.00244173 
 
 
-
 
NC_010501  PputW619_1628  hypothetical protein  71.43 
 
 
102 aa  148  2e-35  Pseudomonas putida W619  Bacteria  normal  0.768078  normal  0.317388 
 
 
-
 
NC_002947  PP_2109  hypothetical protein  74.19 
 
 
102 aa  146  9e-35  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0267756 
 
 
-
 
NC_009512  Pput_3630  hypothetical protein  74.19 
 
 
102 aa  146  1.0000000000000001e-34  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
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