8 homologs were found in PanDaTox collection
for query gene Pput_3630 on replicon NC_009512
Organism: Pseudomonas putida F1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009512  Pput_3630  hypothetical protein  100 
 
 
102 aa  212  9.999999999999999e-55  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2109  hypothetical protein  98.04 
 
 
102 aa  210  7e-54  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0267756 
 
 
-
 
NC_010322  PputGB1_1651  hypothetical protein  93.14 
 
 
102 aa  197  3e-50  Pseudomonas putida GB-1  Bacteria  normal  0.397571  normal  0.497453 
 
 
-
 
NC_010501  PputW619_1628  hypothetical protein  91.18 
 
 
102 aa  192  2e-48  Pseudomonas putida W619  Bacteria  normal  0.768078  normal  0.317388 
 
 
-
 
NC_007492  Pfl01_3965  hypothetical protein  75.76 
 
 
111 aa  153  7e-37  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_52330  hypothetical protein  74.19 
 
 
104 aa  146  1.0000000000000001e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.912922 
 
 
-
 
NC_009656  PSPA7_4589  hypothetical protein  72.04 
 
 
104 aa  142  1e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  0.741123  n/a   
 
 
-
 
NC_009439  Pmen_2106  hypothetical protein  68.75 
 
 
104 aa  141  2e-33  Pseudomonas mendocina ymp  Bacteria  normal  0.317583  decreased coverage  0.00244173 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>