10 homologs were found in PanDaTox collection
for query gene Nham_2562 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_2562  hypothetical protein  100 
 
 
313 aa  635    Nitrobacter hamburgensis X14  Bacteria  normal  0.491763  n/a   
 
 
-
 
NC_007406  Nwi_2162  hypothetical protein  88.18 
 
 
322 aa  568  1e-161  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.788055 
 
 
-
 
NC_007777  Francci3_1064  hypothetical protein  41.67 
 
 
323 aa  197  2.0000000000000003e-49  Frankia sp. CcI3  Bacteria  normal  0.412956  normal 
 
 
-
 
NC_013510  Tcur_1930  hypothetical protein  41.98 
 
 
269 aa  186  6e-46  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00513575  n/a   
 
 
-
 
NC_009380  Strop_0169  hypothetical protein  38.55 
 
 
296 aa  185  8e-46  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5393  hypothetical protein  37.25 
 
 
358 aa  174  1.9999999999999998e-42  Frankia sp. EAN1pec  Bacteria  normal  0.896467  normal 
 
 
-
 
NC_009953  Sare_0182  hypothetical protein  36.82 
 
 
292 aa  171  2e-41  Salinispora arenicola CNS-205  Bacteria  normal  0.527413  decreased coverage  0.000166477 
 
 
-
 
NC_008312  Tery_4092  hypothetical protein  25.55 
 
 
283 aa  88.2  2e-16  Trichodesmium erythraeum IMS101  Bacteria  normal  0.963835  normal  0.0739331 
 
 
-
 
NC_008789  Hhal_0299  hypothetical protein  25.41 
 
 
253 aa  65.9  0.0000000009  Halorhodospira halophila SL1  Bacteria  normal  0.521245  n/a   
 
 
-
 
NC_013889  TK90_1092  hypothetical protein  25.21 
 
 
253 aa  46.6  0.0005  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
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