Gene Francci3_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1064 
Symbol 
ID3905310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1268448 
End bp1269419 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID637878398 
Producthypothetical protein 
Protein accessionYP_480175 
Protein GI86739775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.412956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATTCCG ACGACAGCAG ATATTCTGCC GAGACCACCG ACTCCGACGG AACCACGAAT 
TCCTCCGAGG CCGCGTACCC CACCGGGACG AGGCGGTTCG ACGACAGCGG GAAGATCTCG
CTCGACCACA TCTACACGCA GCCCGACCCG CACGCCTACT TCAGTACCCT GCGGAAACTC
GACTATCGTA TCCCGCAGCT CGCCAAACCG TACTTCAGCC AGCTCATCCG GGAATTCCGG
ATGGTCCGGG GACGACCGCC GACGGTCTTG GACGTGGGCT GCTCCTACGG GATCAACGCC
GCGCTGCTCC GCTGTGACGT GACGTTTGAC GACCTGCACG AGCGCTACGC ACCGCCCGGA
ACCCGGCCGA CCCGGGACGT GCTGCTCGCC CGTGACCGCG AACTCGTCCG GTCCCGCGAC
GGGCTGGAGA CGAGCCGGTT CCTCGGTCTG GACAGCTCGG GGCCGGCCAT CTCCTATGCG
TCCGCGGCTG GGTTCCTCGA TGACGCCGTG CACGCCAACC TGGAGGACCG GGACCCGACC
GACGCCGAAC GGGAGCGGCT CGTCGGAACG GACATCGTCG TCTCGACGGG CTGCCTCGGG
TACGTCACCG AGCGGACCAT CGCCCGGGTG GCCCGCGCGG CCGGTGAGCG CAGGCCGTGG
ATGGCCCACT TCGTGCTGCG GATGTTCCCG TTCGAACCGG TCGAGGCGAC GCTCGCGGGG
CTCGGGTATG AGACCGTGCA CGTCAACGGC GTTTTCCGGC AGCGGCGCTT CGCCTCCGCC
GAGGAGCAGT CGCTCGTGCT CGACACGCTG TCCACCGTCG GCGTCGATCC ACGGGGGCTG
GAGGCCGAGG GCTGGCTGTA CGCCCAGCTG CACATCTCTC GGCCGCGCGG GGTGACCAGT
CCCTCGACCG CTCATCCCGC CTCCGGCCGG CGACCGGCGG CGACATCCAC CCGGCCGGTT
CCGCCAGGCT GA
 
Protein sequence
MYSDDSRYSA ETTDSDGTTN SSEAAYPTGT RRFDDSGKIS LDHIYTQPDP HAYFSTLRKL 
DYRIPQLAKP YFSQLIREFR MVRGRPPTVL DVGCSYGINA ALLRCDVTFD DLHERYAPPG
TRPTRDVLLA RDRELVRSRD GLETSRFLGL DSSGPAISYA SAAGFLDDAV HANLEDRDPT
DAERERLVGT DIVVSTGCLG YVTERTIARV ARAAGERRPW MAHFVLRMFP FEPVEATLAG
LGYETVHVNG VFRQRRFASA EEQSLVLDTL STVGVDPRGL EAEGWLYAQL HISRPRGVTS
PSTAHPASGR RPAATSTRPV PPG