42 homologs were found in PanDaTox collection
for query gene Mpop_1779 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010725  Mpop_1779  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  100 
 
 
333 aa  647    Methylobacterium populi BJ001  Bacteria  normal  0.0409011  normal 
 
 
-
 
NC_010172  Mext_1828  beta-ribofuranosylaminobenzene 5'-phosphate synthase  90.75 
 
 
340 aa  525  1e-148  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2163  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  90.45 
 
 
340 aa  524  1e-148  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0673427  normal  0.202366 
 
 
-
 
NC_010505  Mrad2831_0527  beta-ribofuranosylaminobenzene 5'-phosphate synthase  71.82 
 
 
325 aa  400  9.999999999999999e-111  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.856491 
 
 
-
 
NC_011894  Mnod_6001  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  66.36 
 
 
333 aa  335  7.999999999999999e-91  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.498595  n/a   
 
 
-
 
NC_010511  M446_5777  beta-ribofuranosylaminobenzene 5'-phosphate synthase  64.97 
 
 
323 aa  319  3.9999999999999996e-86  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA2861  GHMP family kinase  48.65 
 
 
347 aa  296  3e-79  Methylococcus capsulatus str. Bath  Bacteria  normal  0.480231  n/a   
 
 
-
 
NC_007947  Mfla_1661  beta-ribofuranosylaminobenzene 5'-phosphate synthase  48.51 
 
 
310 aa  273  2.0000000000000002e-72  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00577565  normal  0.473342 
 
 
-
 
NC_011666  Msil_2384  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  53.14 
 
 
339 aa  252  5.000000000000001e-66  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010625  Bphy_5949  beta-ribofuranosylaminobenzene 5'-phosphate synthase  45.82 
 
 
339 aa  242  6e-63  Burkholderia phymatum STM815  Bacteria  normal  decreased coverage  0.00300733 
 
 
-
 
NC_010625  Bphy_6481  beta-ribofuranosylaminobenzene 5'-phosphate synthase  46.41 
 
 
355 aa  239  2.9999999999999997e-62  Burkholderia phymatum STM815  Bacteria  normal  normal  0.321836 
 
 
-
 
NC_009720  Xaut_3535  beta-ribofuranosylaminobenzene 5'-phosphate synthase  44.2 
 
 
322 aa  238  1e-61  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.904151 
 
 
-
 
NC_007952  Bxe_B2430  beta-ribofuranosylaminobenzene 5'-phosphate synthase  48.56 
 
 
342 aa  230  2e-59  Burkholderia xenovorans LB400  Bacteria  normal  0.100364  normal  0.840747 
 
 
-
 
NC_012791  Vapar_3085  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  42.68 
 
 
348 aa  208  1e-52  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2606  beta-ribofuranosylaminobenzene 5'-phosphate synthase  47.55 
 
 
342 aa  187  2e-46  Methylibium petroleiphilum PM1  Bacteria  normal  0.614879  normal 
 
 
-
 
NC_010524  Lcho_3153  beta-ribofuranosylaminobenzene 5'-phosphate synthase  42.69 
 
 
375 aa  185  8e-46  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009051  Memar_0701  beta-ribofuranosylaminobenzene 5'-phosphate synthase  37.92 
 
 
515 aa  171  1e-41  Methanoculleus marisnigri JR1  Archaea  normal  0.187582  n/a   
 
 
-
 
NC_007955  Mbur_1563  beta-ribofuranosylaminobenzene 5'-phosphate synthase  33.54 
 
 
319 aa  158  1e-37  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00013135  n/a   
 
 
-
 
NC_011832  Mpal_1624  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  31.72 
 
 
524 aa  151  2e-35  Methanosphaerula palustris E1-9c  Archaea  normal  0.931737  normal  0.205569 
 
 
-
 
NC_008553  Mthe_0935  beta-ribofuranosylaminobenzene 5'-phosphate synthase  31.38 
 
 
509 aa  149  5e-35  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1394  beta-ribofuranosylaminobenzene 5'-phosphate synthase  31.31 
 
 
325 aa  149  5e-35  Methanococcus maripaludis C5  Archaea  normal  0.813401  n/a   
 
 
-
 
NC_007355  Mbar_A1222  beta-ribofuranosylaminobenzene 5'-phosphate synthase  31.4 
 
 
318 aa  149  5e-35  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009975  MmarC6_0674  beta-ribofuranosylaminobenzene 5'-phosphate synthase  30.64 
 
 
325 aa  148  1.0000000000000001e-34  Methanococcus maripaludis C6  Archaea  normal  0.2271  n/a   
 
 
-
 
NC_013158  Huta_2356  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  39.16 
 
 
322 aa  147  2.0000000000000003e-34  Halorhabdus utahensis DSM 12940  Archaea  normal  0.37342  n/a   
 
 
-
 
NC_009637  MmarC7_1282  beta-ribofuranosylaminobenzene 5'-phosphate synthase  30.98 
 
 
325 aa  145  1e-33  Methanococcus maripaludis C7  Archaea  normal  0.232636  normal 
 
 
-
 
NC_007355  Mbar_A0806  beta-ribofuranosylaminobenzene 5'-phosphate synthase  31.08 
 
 
321 aa  145  1e-33  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_1148  GHMP kinase group 1  29.22 
 
 
519 aa  142  9e-33  Methanospirillum hungatei JF-1  Archaea  normal  0.820316  normal 
 
 
-
 
NC_009634  Mevan_1290  beta-ribofuranosylaminobenzene 5'-phosphate synthase  28.8 
 
 
325 aa  139  7e-32  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_014148  Plim_2423  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  31.18 
 
 
325 aa  136  4e-31  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.165612  n/a   
 
 
-
 
NC_013743  Htur_2109  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  37.93 
 
 
328 aa  133  3.9999999999999996e-30  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013922  Nmag_0626  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  37.13 
 
 
345 aa  131  2.0000000000000002e-29  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0244  beta-ribofuranosylaminobenzene 5'-phosphate synthase  23.51 
 
 
335 aa  130  3e-29  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_013202  Hmuk_1348  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  37.95 
 
 
326 aa  125  1e-27  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.0110253 
 
 
-
 
NC_012029  Hlac_2038  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  39.04 
 
 
333 aa  123  5e-27  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172756  normal  0.249661 
 
 
-
 
CP001800  Ssol_1345  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  29.29 
 
 
292 aa  104  2e-21  Sulfolobus solfataricus 98/2  Archaea  normal  0.380612  n/a   
 
 
-
 
NC_009440  Msed_1616  beta-ribofuranosylaminobenzene 5'-phosphate synthase  28.57 
 
 
284 aa  103  3e-21  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_009953  Sare_0579  beta-ribofuranosylaminobenzene 5'-phosphate synthase  29.5 
 
 
337 aa  87.8  2e-16  Salinispora arenicola CNS-205  Bacteria  normal  0.195323  normal  0.392757 
 
 
-
 
NC_008345  Sfri_3142  beta-ribofuranosylaminobenzene 5'-phosphate synthase family protein  22.49 
 
 
328 aa  82  0.00000000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.336042  n/a   
 
 
-
 
NC_008254  Meso_2350  beta-ribofuranosylaminobenzene 5'-phosphate synthase  29.11 
 
 
327 aa  70.5  0.00000000004  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_0792  sugar kinase-like protein  28.83 
 
 
310 aa  64.7  0.000000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.178094  n/a   
 
 
-
 
NC_013216  Dtox_2738  sugar kinase-like protein  23.01 
 
 
427 aa  58.9  0.0000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.272805 
 
 
-
 
NC_011832  Mpal_1826  GHMP kinase  26.35 
 
 
357 aa  53.9  0.000004  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.725882 
 
 
-
 
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