| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2861 |
|---|
| Symbol | |
|---|
| ID | 3104078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 3054953 |
|---|
| End bp | 3055996 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637171989 |
|---|
| Product | GHMP family kinase |
|---|
| Protein accession | YP_115254 |
|---|
| Protein GI | 53803050 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1907] Predicted archaeal sugar kinases |
|---|
| TIGRFAM ID | [TIGR00144] beta-RFAP synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.480231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGGCACC GACCGCCCCT GGCCGACCCC GCTCTGCACC ACCCCAACGC CATGCCGAAA
CCGTCTCCAC GCGTCCGTGT CCACGCCCCC GCCCGTCTGC ATCTCGGGTT CATCGACATC
TCCGGCACGT TCGGGCGCCG ATTCGGCAGC ATCGGCGTCG CGATCGACGA TATAGCGACG
CGCCTGAGTC TGTGGCCGAG TCGGGAACCG CGCGCCGCCG GCCCCTCGGC GGAAAAGGCG
CTGGCCATCC TGGAAAAGAT CGAAGCCGCT TTGAGCCTGC CAGGCTCGGC CACGGTCGAA
ATCGAATCGG CGATTCCCGA GCATGTGGGC CTGGGCTCTG GCACGCAGAT GGCTCTTGCC
CTGGGCAGCG CGATCATCCG TGCCTATGGG CTGCCGCTCA CGCCCCGGGA TCTCGCTCCA
CTCATCGAAA GGGGCGCGCG ATCGGGCATC GGCCTGGCGT CGTTCGAACA AGGTGGACTC
ATCGTCGACG GCGGGCGCGG CCCGGAGACC CTCAGTCCGC CGGTGGTCGC CCGACTGCCG
GTGCCGGAGG ACTGGCGCTT CATCCTGGTG TTCGACTCGC GCGGGCAGGG ACTTCACGGC
AAGCAGGAAA TCGACGCCTT CCAGACCTTG CCACCGTTCC CGGAGCAAGA TGCCGCCCGC
CTGAGTCATC TGATCCTGAT GCAGACCCTG CCTGCCCTGG CGGAACAGCG ACTCGAAACC
TTCGGCGCAG GCATCGCCGA GATCCAGCGA TCCGTAGGCG ATTATTTCGC CCCCGCGCAA
GGGGGGCGCT TCACCAGCCC CGGCGTCGCC GCCGCCCTCG ACTGGCTGGC GACGCAAGGC
GCTGTCGGCA TAGGCCAAAG TTCCTGGGGA CCCACGGGAT TCTGTCTCGT CGCTTCGGAA
CCGGAGGCGC GGCGATTGGC AGCGGCGGCC GCCAATCGGA ACATCGCAGC GCACCTGGAT
TTCAGAATCG CTCGGCCGCG CAACAGGGGG GCCGATGTGA CGCTTGCGAT AGCGGCCCCC
GAGCCGGCCT CCCTGCAAGC CTAG
|
|---|
| Protein sequence | MRHRPPLADP ALHHPNAMPK PSPRVRVHAP ARLHLGFIDI SGTFGRRFGS IGVAIDDIAT
RLSLWPSREP RAAGPSAEKA LAILEKIEAA LSLPGSATVE IESAIPEHVG LGSGTQMALA
LGSAIIRAYG LPLTPRDLAP LIERGARSGI GLASFEQGGL IVDGGRGPET LSPPVVARLP
VPEDWRFILV FDSRGQGLHG KQEIDAFQTL PPFPEQDAAR LSHLILMQTL PALAEQRLET
FGAGIAEIQR SVGDYFAPAQ GGRFTSPGVA AALDWLATQG AVGIGQSSWG PTGFCLVASE
PEARRLAAAA ANRNIAAHLD FRIARPRNRG ADVTLAIAAP EPASLQA
|
|---|
| |