9 homologs were found in PanDaTox collection
for query gene Mnod_1470 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_1470  Propeptide PepSY amd peptidase M4  100 
 
 
190 aa  382  1e-105  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.482042  n/a   
 
 
-
 
NC_010505  Mrad2831_1353  peptidase  70.53 
 
 
189 aa  246  1e-64  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.382805  normal  0.0680656 
 
 
-
 
NC_010511  M446_5667  peptidase  74.69 
 
 
205 aa  244  4.9999999999999997e-64  Methylobacterium sp. 4-46  Bacteria  normal  0.233343  normal 
 
 
-
 
NC_010725  Mpop_4448  propeptide PepSY amd peptidase M4  63.82 
 
 
205 aa  243  9.999999999999999e-64  Methylobacterium populi BJ001  Bacteria  normal  0.345934  normal  0.288379 
 
 
-
 
NC_010172  Mext_3968  peptidase  62.81 
 
 
238 aa  241  6e-63  Methylobacterium extorquens PA1  Bacteria  normal  0.0247795  normal 
 
 
-
 
NC_011757  Mchl_4336  Propeptide PepSY amd peptidase M4  61.81 
 
 
205 aa  237  5.999999999999999e-62  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.188591 
 
 
-
 
NC_009952  Dshi_0422  propeptide PepSY amd peptidase M4  28.41 
 
 
173 aa  43.5  0.002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3061  peptidase  27.59 
 
 
128 aa  43.1  0.003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3467  peptidase  25 
 
 
233 aa  41.2  0.009  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
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