29 homologs were found in PanDaTox collection
for query gene Mext_0156 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_0156  hypothetical protein  100 
 
 
161 aa  334  2.9999999999999997e-91  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6262  hypothetical protein  65.52 
 
 
148 aa  201  4e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1499  hypothetical protein  38.41 
 
 
185 aa  117  4.9999999999999996e-26  Maricaulis maris MCS10  Bacteria  normal  0.969669  normal 
 
 
-
 
NC_007516  Syncc9605_1005  hypothetical protein  42.42 
 
 
161 aa  108  4.0000000000000004e-23  Synechococcus sp. CC9605  Bacteria  normal  0.0710968  normal  0.895928 
 
 
-
 
NC_008820  P9303_18311  6-pyruvoyl-tetrahydropterin synthase  41.22 
 
 
161 aa  107  8.000000000000001e-23  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.148914 
 
 
-
 
NC_007513  Syncc9902_0910  hypothetical protein  44.27 
 
 
154 aa  103  7e-22  Synechococcus sp. CC9902  Bacteria  normal  0.207022  n/a   
 
 
-
 
NC_008816  A9601_06351  6-pyruvoyl-tetrahydropterin synthase  32.64 
 
 
156 aa  90.9  6e-18  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.885424  n/a   
 
 
-
 
NC_007577  PMT9312_0579  6-pyruvoyl-tetrahydropterin synthase  32.64 
 
 
156 aa  90.5  9e-18  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.290882  n/a   
 
 
-
 
NC_009976  P9211_05831  6-pyruvoyl-tetrahydropterin synthase  39.47 
 
 
157 aa  90.1  1e-17  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_009091  P9301_06051  6-pyruvoyl-tetrahydropterin synthase  31.94 
 
 
156 aa  89.4  2e-17  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.910841  n/a   
 
 
-
 
NC_008817  P9515_06441  6-pyruvoyl-tetrahydropterin synthase  31.47 
 
 
154 aa  87.8  6e-17  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.621849  n/a   
 
 
-
 
NC_007335  PMN2A_0015  6-pyruvoyl-tetrahydropterin synthase  35.58 
 
 
156 aa  82.4  0.000000000000002  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_06351  6-pyruvoyl-tetrahydropterin synthase  36.54 
 
 
156 aa  81.6  0.000000000000004  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_5204  hypothetical protein  30 
 
 
146 aa  56.2  0.0000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0320  6-pyruvoyl tetrahydropterin synthase and hypothetical protein  41.58 
 
 
156 aa  53.5  0.000001  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_1289  6-pyruvoyl tetrahydropterin synthase and hypothetical protein  23.57 
 
 
162 aa  53.1  0.000002  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0602  putative 6-pyruvoyl tetrahydropterin synthase  31.45 
 
 
139 aa  52  0.000003  Opitutus terrae PB90-1  Bacteria  normal  0.746665  normal 
 
 
-
 
NC_002950  PG1056  hypothetical protein  43.55 
 
 
139 aa  51.2  0.000006  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.0353298 
 
 
-
 
NC_010655  Amuc_2146  6-pyruvoyl-tetrahydropterin synthase-like protein  37.29 
 
 
150 aa  50.4  0.00001  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.314804  normal  0.556653 
 
 
-
 
NC_010730  SYO3AOP1_1241  6-pyruvoyl tetrahydropterin synthase and hypothetical protein  23.14 
 
 
161 aa  50.4  0.00001  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2527  6-pyruvoyl tetrahydropterin synthase, putative  32.67 
 
 
137 aa  50.4  0.00001  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_4125  6-pyruvoyl tetrahydropterin synthase and hypothetical protein  29.63 
 
 
136 aa  48.5  0.00004  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_0817  6-pyruvoyl-tetrahydropterin synthase-like protein  32.32 
 
 
197 aa  43.9  0.0009  Psychrobacter sp. PRwf-1  Bacteria  decreased coverage  0.00000000396558  normal 
 
 
-
 
NC_009667  Oant_1009  putative 6-pyruvoyl tetrahydropterin synthase  37.5 
 
 
118 aa  42.7  0.002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4938  putative 6-pyruvoyl tetrahydropterin synthase  25.23 
 
 
118 aa  42.7  0.002  Sinorhizobium medicae WSM419  Bacteria  normal  0.0732019  normal  0.41518 
 
 
-
 
NC_012850  Rleg_3789  6-pyruvoyl tetrahydropterin synthase and hypothetical protein  25.23 
 
 
118 aa  42  0.004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_1898  queuosine biosynthesis protein QueD  37.5 
 
 
121 aa  41.6  0.005  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR1973  6-pyruvoyl tetrahydrobiopterin synthase, putative  37.5 
 
 
121 aa  41.6  0.005  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2046  putative 6-pyruvoyl tetrahydropterin synthase  35.48 
 
 
117 aa  41.2  0.006  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
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