8 homologs were found in PanDaTox collection
for query gene Meso_R0010 on replicon NC_008254
Organism: Chelativorans sp. BNC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008254  Meso_R0010  tRNA-OTHER  100 
 
 
74 bp  147  4.0000000000000006e-34  Chelativorans sp. BNC1  Bacteria  normal  0.498226  n/a   
 
 
-
 
NC_003295  RSc0895.1    96.3 
 
 
360 bp  46.1  0.001  Ralstonia solanacearum GMI1000  Bacteria  normal  0.285075  normal  0.493931 
 
 
-
 
NC_007347  Reut_AR0045    96.3 
 
 
360 bp  46.1  0.001  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_R0023    96.3 
 
 
367 bp  46.1  0.001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_R0007    96.3 
 
 
360 bp  46.1  0.001  Cupriavidus metallidurans CH34  Bacteria  normal  0.371342  normal 
 
 
-
 
NC_010682  Rpic_R0067    96.15 
 
 
357 bp  44.1  0.004  Ralstonia pickettii 12J  Bacteria  normal  0.162671  normal  0.0116195 
 
 
-
 
NC_012856  Rpic12D_R0008    96.15 
 
 
357 bp  44.1  0.004  Ralstonia pickettii 12D  Bacteria  normal  normal  0.144827 
 
 
-
 
NC_013172  Bfae_20280    96.15 
 
 
370 bp  44.1  0.004  Brachybacterium faecium DSM 4810  Bacteria  normal  0.901931  n/a   
 
 
-
 
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