8 homologs were found in PanDaTox collection
for query gene Mboo_R0030 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009712  Mboo_R0030  tRNA-Asp  100 
 
 
73 bp  145  2e-33  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.787205  normal  0.479074 
 
 
-
 
NC_011832  Mpal_R0055  tRNA-Asp  93.15 
 
 
76 bp  105  1e-21  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009051  Memar_R0032  tRNA-Asp  90.41 
 
 
76 bp  89.7  8e-17  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_R0028  tRNA-Asp  87.67 
 
 
73 bp  73.8  0.000000000005  Methanospirillum hungatei JF-1  Archaea  normal  0.926195  normal  0.035685 
 
 
-
 
NC_007796  Mhun_R0052  tRNA-Asp  87.67 
 
 
73 bp  73.8  0.000000000005  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008942  Mlab_R0049  tRNA-Asp  84.93 
 
 
73 bp  58  0.0000003  Methanocorpusculum labreanum Z  Archaea  hitchhiker  0.0000000227273  decreased coverage  0.00000000261131 
 
 
-
 
NC_008942  Mlab_R0050  tRNA-Asp  84.93 
 
 
73 bp  58  0.0000003  Methanocorpusculum labreanum Z  Archaea  hitchhiker  0.0000000210067  decreased coverage  0.00000000256467 
 
 
-
 
NC_013926  ABOO_t15  tRNA-Asp  100 
 
 
128 bp  44.1  0.004  Aciduliprofundum boonei T469  Archaea  normal  0.150704  n/a   
 
 
-
 
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