4 homologs were found in PanDaTox collection
for query gene MSED_t5 on replicon NC_009440
Organism: Metallosphaera sedula DSM 5348



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009440  MSED_t5  tRNA-Trp  100 
 
 
132 bp  262  2e-68  Metallosphaera sedula DSM 5348  Archaea  normal  hitchhiker  0.000378916 
 
 
-
 
CP001800  Ssol_R0007  tRNA-Trp  90.7 
 
 
139 bp  46.1  0.002  Sulfolobus solfataricus 98/2  Archaea  normal  0.249793  n/a   
 
 
-
 
NC_009954  Cmaq_R0021  tRNA-Lys  96.15 
 
 
75 bp  44.1  0.009  Caldivirga maquilingensis IC-167  Archaea  normal  normal  0.360576 
 
 
-
 
NC_009954  Cmaq_R0036  tRNA-Arg  96.15 
 
 
78 bp  44.1  0.009  Caldivirga maquilingensis IC-167  Archaea  normal  0.633015  normal 
 
 
-
 
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