7 homologs were found in PanDaTox collection
for query gene MADE_00345 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_00345  HupH hydrogenase expression protein  100 
 
 
144 aa  296  5e-80  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1379  hypothetical protein  35.9 
 
 
136 aa  75.9  0.0000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0546269  normal 
 
 
-
 
NC_009475  BBta_p0170  hypothetical protein  30.43 
 
 
133 aa  67.4  0.00000000007  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal 
 
 
-
 
NC_011901  Tgr7_1270  hypothetical protein  33.06 
 
 
150 aa  65.9  0.0000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2880  HupH hydrogenase expression protein  31.43 
 
 
138 aa  60.5  0.000000007  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.987581 
 
 
-
 
NC_011761  AFE_3282  hydrogenase expression protein, putative  31.43 
 
 
136 aa  60.5  0.000000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0045  HupH hydrogenase expression protein  23.53 
 
 
129 aa  47  0.00009  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
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