17 homologs were found in PanDaTox collection
for query gene Lreu_1745 on replicon NC_009513
Organism: Lactobacillus reuteri DSM 20016



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009513  Lreu_1745  dehydratase, small subunit  100 
 
 
172 aa  356  7e-98  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2378  propanediol dehydratase small subunit  45.83 
 
 
173 aa  160  6e-39  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2165  propanediol dehydratase small subunit  45.83 
 
 
173 aa  160  6e-39  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2212  propanediol dehydratase small subunit  45.83 
 
 
173 aa  160  6e-39  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2265  propanediol dehydratase small subunit  45.83 
 
 
173 aa  160  6e-39  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.167343 
 
 
-
 
NC_011080  SNSL254_A2219  propanediol dehydratase small subunit  45.24 
 
 
173 aa  160  1e-38  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_1175  coenzyme B12-dependent glycerol dehydratase, small subunit  52.94 
 
 
141 aa  152  2.9999999999999998e-36  Clostridium perfringens ATCC 13124  Bacteria  normal  0.246505  n/a   
 
 
-
 
NC_008262  CPR_1006  glycerol dehydrase, gamma subunit  52.94 
 
 
141 aa  152  2.9999999999999998e-36  Clostridium perfringens SM101  Bacteria  normal  0.0790386  n/a   
 
 
-
 
NC_009801  EcE24377A_2283  propanediol utilization dehydratase, small subunit  45.56 
 
 
172 aa  149  2e-35  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1033  dehydratase small subunit  49.29 
 
 
166 aa  145  2.0000000000000003e-34  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0756637  n/a   
 
 
-
 
NC_010320  Teth514_1951  dehydratase, small subunit  44.79 
 
 
174 aa  143  9e-34  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0283  dehydratase small subunit  40 
 
 
169 aa  117  9.999999999999999e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5562  propanediol utilization: dehydratase, small subunit  37.5 
 
 
119 aa  72.4  0.000000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.585272  normal 
 
 
-
 
NC_009338  Mflv_1246  propanediol utilization: dehydratase, small subunit  36.36 
 
 
109 aa  72  0.000000000004  Mycobacterium gilvum PYR-GCK  Bacteria  hitchhiker  0.00266444  decreased coverage  0.00000153373 
 
 
-
 
NC_009077  Mjls_5334  dehydratase, small subunit  34.82 
 
 
110 aa  64.3  0.0000000008  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4953  propanediol utilization: dehydratase, small subunit  34.82 
 
 
110 aa  63.5  0.000000001  Mycobacterium sp. MCS  Bacteria  normal  0.0488031  n/a   
 
 
-
 
NC_008705  Mkms_5041  propanediol dehydratase, small subunit  34.82 
 
 
110 aa  63.5  0.000000001  Mycobacterium sp. KMS  Bacteria  normal  0.110664  normal 
 
 
-
 
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