Gene CPR_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1006 
SymboldhaE 
ID4205344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1147520 
End bp1147945 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content31% 
IMG OID642565563 
Productglycerol dehydrase, gamma subunit 
Protein accessionYP_698329 
Protein GI110802854 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4910] Propanediol dehydratase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0790386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA AGAGAATGAC TGCTGCAGAT TATCCTTTAA CTTCTAAGAG AAAAGGAGAT 
ATAAAAACTC CTACAGGAAA AGCTTTAGAA GATATAACTT TAGAAAAAGT TTTAAGTGGA
GAAATCAATG CAGATGATAT AAGAATTTCA CCAGAAACTT TAGAAATGCA AGCTCAAATA
GCTGAAAGCA TGAACAGAGA TGCTATAGCT AGAAACTTTA GAAGAGCTGC GGAGCTTATA
AGAGTTCCAG ACGATAGAAT ATTAGAGATG TACAACGCTT TAAGACCATA TCGTTCAACA
AAAGAAGATT TATTCAAAAT AGCTGATGAA CTTGAAACAA AATATGATGC TAAAGTTAAT
GCTAATTTTG TTAGAGAAGC AGCTGAAGTA TATGAAACTA GAAATAAATT AAGAATAGAA
GAGTAA
 
Protein sequence
MENKRMTAAD YPLTSKRKGD IKTPTGKALE DITLEKVLSG EINADDIRIS PETLEMQAQI 
AESMNRDAIA RNFRRAAELI RVPDDRILEM YNALRPYRST KEDLFKIADE LETKYDAKVN
ANFVREAAEV YETRNKLRIE E