Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1006 |
Symbol | dhaE |
ID | 4205344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1147520 |
End bp | 1147945 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565563 |
Product | glycerol dehydrase, gamma subunit |
Protein accession | YP_698329 |
Protein GI | 110802854 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4910] Propanediol dehydratase, small subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0790386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA AGAGAATGAC TGCTGCAGAT TATCCTTTAA CTTCTAAGAG AAAAGGAGAT ATAAAAACTC CTACAGGAAA AGCTTTAGAA GATATAACTT TAGAAAAAGT TTTAAGTGGA GAAATCAATG CAGATGATAT AAGAATTTCA CCAGAAACTT TAGAAATGCA AGCTCAAATA GCTGAAAGCA TGAACAGAGA TGCTATAGCT AGAAACTTTA GAAGAGCTGC GGAGCTTATA AGAGTTCCAG ACGATAGAAT ATTAGAGATG TACAACGCTT TAAGACCATA TCGTTCAACA AAAGAAGATT TATTCAAAAT AGCTGATGAA CTTGAAACAA AATATGATGC TAAAGTTAAT GCTAATTTTG TTAGAGAAGC AGCTGAAGTA TATGAAACTA GAAATAAATT AAGAATAGAA GAGTAA
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Protein sequence | MENKRMTAAD YPLTSKRKGD IKTPTGKALE DITLEKVLSG EINADDIRIS PETLEMQAQI AESMNRDAIA RNFRRAAELI RVPDDRILEM YNALRPYRST KEDLFKIADE LETKYDAKVN ANFVREAAEV YETRNKLRIE E
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