3 homologs were found in PanDaTox collection
for query gene Lcho_4184 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_4184  hypothetical protein  100 
 
 
112 aa  220  4e-57  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007973  Rmet_0209  hypothetical protein  37.18 
 
 
112 aa  44.3  0.0006  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0252  hypothetical protein  38.33 
 
 
113 aa  42.7  0.002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
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