8 homologs were found in PanDaTox collection
for query gene Lcho_4174 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_4174  hypothetical protein  100 
 
 		 103 aa  210  5.999999999999999e-54  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008752  Aave_1245  hypothetical protein  57.29 
 
 		 109 aa  115  1.9999999999999998e-25  Acidovorax citrulli AAC00-1  Bacteria  normal  0.654483  hitchhiker  0.00594466 
 
 
-
 
NC_012791  Vapar_5214  hypothetical protein  55.21 
 
 		 104 aa  109  1.0000000000000001e-23  Variovorax paradoxus S110  Bacteria  normal  0.227126  n/a   
 
 
-
 
NC_008782  Ajs_3201  hypothetical protein  53.12 
 
 		 109 aa  100  8e-21  Acidovorax sp. JS42  Bacteria  normal  0.280987  normal  1 
 
 
-
 
NC_011992  Dtpsy_2554  hypothetical protein  53.12 
 
 		 109 aa  100  8e-21  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_5212  hypothetical protein  42.71 
 
 		 114 aa  77.8  0.00000000000005  Delftia acidovorans SPH-1  Bacteria  normal  0.256256  normal  1 
 
 
-
 
NC_008825  Mpe_A0004  hypothetical protein  39.18 
 
 		 105 aa  57.4  0.00000007  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012855  Rpic12D_4718  hypothetical protein  40.28 
 
 		 114 aa  45.4  0.0002  Ralstonia pickettii 12D  Bacteria  normal  0.974871  normal  0.136432 
 
 
-
 
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