Gene Vapar_5214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5214 
Symbol 
ID7969873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5535818 
End bp5536132 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content70% 
IMG OID644795808 
Producthypothetical protein 
Protein accessionYP_002947082 
Protein GI239818172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.227126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACG ACAACCAGAT CTTCATTCCG CCCTCGTTCT TCGCGGTCTA CAGCGATGCG 
CGCCAGCGCC TCTCGGAGCC GATCGGCGTG GTGCGCGAGC GCTACGAGAT CTGCGAGGAC
CTGGCCAGCC ACCTGGTGGG CCACGCGCAG ATCCAGCACC ACACCGAGGT GCCGGTCGAG
AGCGAGATCC TTCGGCGCAT CCACGCCGGG CTCAGGGCGC CCGAAGCCGG CGTGTCGGCC
GCCGAGGCCG GCTGGATCGT GCAGCGGCTG GCTGAATTGC TGGGCTGGCC CGGACCCGAG
CTGGCTGCGG ACTGA
 
Protein sequence
MSDDNQIFIP PSFFAVYSDA RQRLSEPIGV VRERYEICED LASHLVGHAQ IQHHTEVPVE 
SEILRRIHAG LRAPEAGVSA AEAGWIVQRL AELLGWPGPE LAAD