Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5214 |
Symbol | |
ID | 7969873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5535818 |
End bp | 5536132 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644795808 |
Product | hypothetical protein |
Protein accession | YP_002947082 |
Protein GI | 239818172 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.227126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGACG ACAACCAGAT CTTCATTCCG CCCTCGTTCT TCGCGGTCTA CAGCGATGCG CGCCAGCGCC TCTCGGAGCC GATCGGCGTG GTGCGCGAGC GCTACGAGAT CTGCGAGGAC CTGGCCAGCC ACCTGGTGGG CCACGCGCAG ATCCAGCACC ACACCGAGGT GCCGGTCGAG AGCGAGATCC TTCGGCGCAT CCACGCCGGG CTCAGGGCGC CCGAAGCCGG CGTGTCGGCC GCCGAGGCCG GCTGGATCGT GCAGCGGCTG GCTGAATTGC TGGGCTGGCC CGGACCCGAG CTGGCTGCGG ACTGA
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Protein sequence | MSDDNQIFIP PSFFAVYSDA RQRLSEPIGV VRERYEICED LASHLVGHAQ IQHHTEVPVE SEILRRIHAG LRAPEAGVSA AEAGWIVQRL AELLGWPGPE LAAD
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