9 homologs were found in PanDaTox collection
for query gene Lcho_3613 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_3613  hypothetical protein  100 
 
 
313 aa  609  1e-173  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00145528 
 
 
-
 
NC_007298  Daro_3578  hypothetical protein  63.76 
 
 
296 aa  344  8.999999999999999e-94  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.953363 
 
 
-
 
NC_008554  Sfum_2673  hypothetical protein  38.7 
 
 
297 aa  158  9e-38  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.458199 
 
 
-
 
NC_007760  Adeh_3980  hypothetical protein  33.45 
 
 
304 aa  123  5e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0439  hypothetical protein  37.04 
 
 
279 aa  116  5e-25  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_4091  hypothetical protein  33.66 
 
 
319 aa  114  2.0000000000000002e-24  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4123  hypothetical protein  33.33 
 
 
319 aa  114  2.0000000000000002e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.525238  n/a   
 
 
-
 
NC_002967  TDE1021  putative lipoprotein  27 
 
 
324 aa  82.8  0.000000000000007  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0465  hypothetical protein  29.43 
 
 
291 aa  60.5  0.00000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.79091  normal 
 
 
-
 
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