5 homologs were found in PanDaTox collection
for query gene Lcho_3307 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_3307  dual specificity protein phosphatase  100 
 
 
148 aa  303  4.0000000000000004e-82  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009140  SNSL254_pSN254_0179  hypothetical protein  29.5 
 
 
178 aa  62.4  0.000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.187413 
 
 
-
 
NC_008759  Pnap_4904  hypothetical protein  32.74 
 
 
160 aa  60.5  0.000000008  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.142418 
 
 
-
 
NC_009074  BURPS668_3498  hypothetical protein  36.54 
 
 
146 aa  59.3  0.00000002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0976  hypothetical protein  37.39 
 
 
159 aa  58.5  0.00000003  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
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