Gene SNSL254_pSN254_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0179 
Symbol 
ID4929454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp158110 
End bp158646 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content50% 
IMG OID642572476 
Producthypothetical protein 
Protein accessionYP_001102051 
Protein GI134047147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.187413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGCA AAAAAGTCTT TTTCATTAGT CAAGCGGAGG CCGAAAGACT GGAGCCGGTT 
CCCGGTGCGG CCATGATCTC CATAACTGAC CCAGACAAGT CCCCTGCCGC TCTCGGACAG 
TGGGGGCAGT TGTACCGCGA TAGCTTCTAT GACGGCGGCT ATTCTGAGAA CACCATCCAC 
ACGATGAAGG CAGCGTTCCG GATGAATTAC GCCTCTTACA TTGACTCATC CCAGGCTGAA 
AAGCTGTCCA CCTTCCTGGA TGGATTGGTT GGTAGCGGTA TCGATCAGAT CTTCGTTCAT 
TGCTATTACG GAGAATCCAG AAGTGGCGCG GTAGCGCTGT ACCTCCAGAA CAAACATGGA 
TTCACTCCGA ATAAGCCGAT CACCAAGCCC AACCGAACAG TTTACGAATT GCTGTGCAAT 
CCAACCAAGT TTGAACCACT GATGCAAAGC TACGAAACGC AACATATGGA GGAGGAACTA 
CCTCTTCACC TCAAAATATG GGATTTTCTT CTCGTTGCGG TCGGGCTTAG GAGGTAA
 
Protein sequence
MLSKKVFFIS QAEAERLEPV PGAAMISITD PDKSPAALGQ WGQLYRDSFY DGGYSENTIH 
TMKAAFRMNY ASYIDSSQAE KLSTFLDGLV GSGIDQIFVH CYYGESRSGA VALYLQNKHG 
FTPNKPITKP NRTVYELLCN PTKFEPLMQS YETQHMEEEL PLHLKIWDFL LVAVGLRR